PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1091510.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 718aa    MW: 77773.9 Da    PI: 6.5963
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1091510.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.33e-27232285155
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        kpr++W+ eLH++Fv+av+qL G +kA+Pk+ilelm+v+gL++e+v+SHLQk+Rl
  Pd.00g1091510.m01 232 KPRVVWSVELHQQFVSAVNQL-GLDKAVPKRILELMNVPGLSRENVASHLQKFRL 285
                        79*******************.********************************8 PP
2Myb_DNA-binding391.9e-12234284148
                        TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        r  W+ e+++++v av+qlG +   +k+I + m+  g++++++ s++qk++
  Pd.00g1091510.m01 234 RVVWSVELHQQFVSAVNQLGLDkaVPKRILELMNvPGLSRENVASHLQKFR 284
                        678**********************************************97 PP
3Response_reg74.83.2e-25481561109
                        EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS
       Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90 
                        vl+vdD+ + +++l+++l +  y +v+++++++ al+ll+e++  +D++l D+ mp+mdG++ll++   e  +lp+i+++a g  + + + +
  Pd.00g1091510.m01  48 VLVVDDDTTCLRILEVLLGRCAY-QVTACSQATVALNLLRERKgcFDVVLSDVHMPDMDGFKLLEHVGLEM-DLPVIMMSADGRTSAVMQGI 137
                        89*********************.*******************************************6644.8******************* PP

                        HTTESEEEESS--HHHHHH CS
       Response_reg  91 kaGakdflsKpfdpeelvk 109
                        + Ga d+l Kp++++el +
  Pd.00g1091510.m01 138 RHGACDYLIKPIHEAELKN 156
                        ****************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 718 aa     Download sequence    
MAALQRVAQS SVSTTASSYG SCKGGAASSF SAANEMAVSD RFPAGLRVLV VDDDTTCLRI  60
LEVLLGRCAY QVTACSQATV ALNLLRERKG CFDVVLSDVH MPDMDGFKLL EHVGLEMDLP  120
VIMMSADGRT SAVMQGIRHG ACDYLIKPIH EAELKNIWQH VVRKKWNGNK ELDHSGSLED  180
NDRNKRGNSD VEYTSSVNEG TEVILKGPKK RSNAKEDDDG DMENDDPSTS KKPRVVWSVE  240
LHQQFVSAVN QLGLDKAVPK RILELMNVPG LSRENVASHL QKFRLYLKRL AQQQSGISNG  300
FCGPVESNGK LGSLSRFDIQ ALAASGQIPP QTLAVLQAEL LGQPAGNLVP SMDQPAILHS  360
SLQGPKRAPV EHGVPFVQPL IKCQSNVSKH FPQSIIPAED VSSGFGSWRS NSLSTVAPSN  420
NLGGLATHNS SMLMDIMQQE QRQHKKTQQQ SVLTESSRLI NVQPSCLVVP SQSSTSFQAG  480
NSPASVNQSC SFNRSTVMDY SILSAQSNNS SLNIGHIPTG NLKTPSILDG YSAPGSVPST  540
SCSVNAGNNT SHQNSAVPFC DSRQLPGVLH DMSNIQGLYV DKSGEMLDQG PHRNLGFVGK  600
ETGIPSQFEV DDFESQVSNL NHGKIYVENN GNPVKEEPMC SLNRLLLCDL ISVPAPELGV  660
ERPSVPGTQK LRTNLICGGW RFTFMKRVRD LPKEEEQLAA KSLDIGDLIL KGISDLAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-114ARR-B family protein