PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1092000.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 180aa    MW: 19228.4 Da    PI: 10.8292
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1092000.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.26.5e-213787256
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                       +y GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  Pd.00g1092000.m01 37 RYVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 87
                       69*******.7*********43...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MAGPEVFTKT TAATSSPTNN KTMVTKSPST TKTALRRYVG VRQRPSGRWV AEIKDSSQRV  60
RLWLGTYDTP EEAARAYDEA ARALRGENAR TNFVSPGPAT NPNSSPLVSS VSNGGFMSGS  120
DGRHSGTGGL SFSSLKAKLS KNLQSIMARS SDHNKSSKSR VDASSLSEER FSVVMCFGEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-16ERF family protein