PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1092070.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 509aa MW: 55368.6 Da PI: 8.8606

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1092070.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	34.8	4.2e-11	173	229	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g + +e+Aa+a++ a++k++g Pd.00g1092070.m01 173 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQGG-YAKEEKAARAYDLAALKYWG 229 57*****************5544.235444777766.5555************98 PP
2	AP2	47.3	5.3e-15	272	323	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Pd.00g1092070.m01 272 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 323 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MDSSPQNWLL GFSLSNHSHH RHPSHDLSLF EAFASSPSHT SAHQQQDHSN PGGATPPPTD 60 LSIFSSGVGG PKLEDFLGGS TATPTSLAHF SGTTAAADHH HNHQQTAPLA LSESEIYDSE 120 LKTIAASFLR GFSTPATASA TSVQTTKPQN LVPLASSELT PKKTADTFGQ RTSIYRGVTR 180 HRWTGRYEAH LWDNSCRREG QSRKGRQGGY AKEEKAARAY DLAALKYWGP TTTTNFPVSH 240 YEKELNEMKN MTRQEFVASL RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY 300 LGTFSTQEEA AEAYDIAAIK FRGLNAVTNF DMTRYDVKSI ANSNLPIGGM SGKSKNSSDS 360 DGKSIEGNRS ADDRDLSSAS SVTFASQQPS SSTLSFAIPI KQDPSTDYWS NIFGYHHNAK 420 NPSTVSVAPS SLFQSCTTNV PYGNNSSQIP FNMDFSVSAT SSTSPSETNN GNNGFETTSG 480 YGSWIGPSLH TFQTHAKTNL FQTPIFGME

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MDSSPQNWLL GFSLSNHSHH RHPSHDLSLF EAFASSPSHT SAHQQQDHSN PGGATPPPTD  60
LSIFSSGVGG PKLEDFLGGS TATPTSLAHF SGTTAAADHH HNHQQTAPLA LSESEIYDSE  120
LKTIAASFLR GFSTPATASA TSVQTTKPQN LVPLASSELT PKKTADTFGQ RTSIYRGVTR  180
HRWTGRYEAH LWDNSCRREG QSRKGRQGGY AKEEKAARAY DLAALKYWGP TTTTNFPVSH  240
YEKELNEMKN MTRQEFVASL RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY  300
LGTFSTQEEA AEAYDIAAIK FRGLNAVTNF DMTRYDVKSI ANSNLPIGGM SGKSKNSSDS  360
DGKSIEGNRS ADDRDLSSAS SVTFASQQPS SSTLSFAIPI KQDPSTDYWS NIFGYHHNAK  420
NPSTVSVAPS SLFQSCTTNV PYGNNSSQIP FNMDFSVSAT SSTSPSETNN GNNGFETTSG  480
YGSWIGPSLH TFQTHAKTNL FQTPIFGME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57390.1	1e-145	AP2 family protein