PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1093830.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 353aa MW: 40198.6 Da PI: 4.4046

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1093830.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	55.4	2e-17	7	143	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWka 85 p GfrF+P+dee+v +L + + ++k ++l + ++ +++ +++eP+++ kk+ + ++++yf sk +k ++ ++ +r+ + g+W++ Pd.00g1093830.m01 7 PFGFRFRPSDEEIVGSFLYPFLVESKpfMSLYNNfFHACNLfgNNTEPSEIWKKYGGpqlVDTDLYFISKLKKLTP-KRMDRRIGNGGTWSE 97 89****************97776658555444489999733589*8544433224557777777766554.5566668999* PP NAM 86 tgkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128 t ++k v++k + + +g k+ + + + + + +t W+++ey+l Pd.00g1093830.m01 98 TESSKLVHEKvsgnpNPNPIGRKRKFRYEN--KGSEDHTGWLLDEYSL 143 ***999877666667****984..334469******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MEESLVPFGF RFRPSDEEIV GSFLYPFLVE SKPFMSLYNN FFHACNLFGN NTEPSEIWKK 60 YGGPQLVDTD LYFISKLKKL TPKRMDRRIG NGGTWSETES SKLVHEKVSG NPNPNPIGRK 120 RKFRYENKGS EDHTGWLLDE YSLFDGPKND YNQRSYDFDF VICRMRKNDR VGIRATNLKR 180 GSQDKKEKKM TTNKKMKKDD QMGSTESSSQ QGCSSSPIGG DLVGFDPIDL TIFEENTMAD 240 MEQLLGEDWS PSNFENEENT MASSMEQLLG EAWSPSNFED AVSYDVDPIG ETQINFENEE 300 NTMANMEQLL GEAWSPSNFE NVVSHDVDPI GETQSSQLSN WSQAMLDQLL VGV

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MEESLVPFGF RFRPSDEEIV GSFLYPFLVE SKPFMSLYNN FFHACNLFGN NTEPSEIWKK  60
YGGPQLVDTD LYFISKLKKL TPKRMDRRIG NGGTWSETES SKLVHEKVSG NPNPNPIGRK  120
RKFRYENKGS EDHTGWLLDE YSLFDGPKND YNQRSYDFDF VICRMRKNDR VGIRATNLKR  180
GSQDKKEKKM TTNKKMKKDD QMGSTESSSQ QGCSSSPIGG DLVGFDPIDL TIFEENTMAD  240
MEQLLGEDWS PSNFENEENT MASSMEQLLG EAWSPSNFED AVSYDVDPIG ETQINFENEE  300
NTMANMEQLL GEAWSPSNFE NVVSHDVDPI GETQSSQLSN WSQAMLDQLL VGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56530.1	1e-09	NAC family protein