PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1096000.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 586aa MW: 65510.4 Da PI: 4.341

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1096000.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80.8	3e-25	141	259	13	128
NAM 13 elvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 +l ++Lk+ ++gk + i+e+d+yk+ePwdL + + + w+ Fs+ d kya++ r nrat++g+Wk tgk+++v+s+ ++ Pd.00g1096000.m01 141 QLFGRFLKRMMQGKASQS---IPEIDVYKYEPWDLAElmfpDSPYQPRAWFSFSRPDYKYANSPRCNRATEKGFWKITGKTRQVKSRqlPKS 229 577899****999666...**********8444553333778**********************************866566 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++ k+tL+f++gr +k+++t Wv +ey l Pd.00g1096000.m01 230 VTCKKRTLTFHEGRVSKSRNTGWVRQEYYL 259 677889********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 586 aa Download sequence
MISVDEDHVW EEYVKSHDDA RGFRFKVIEH WDDIVDLCGK NSATGWHAET GADAIEVMTP 60 PTNEVEHVEL DGDTQAEGGM SSSMSTTEES VLDLLPKFRF HPSEEEMVNL LKNKVNGQDS 120 QAMPDEIVDK PWDLPDNESI QLFGRFLKRM MQGKASQSIP EIDVYKYEPW DLAELMFPDS 180 PYQPRAWFSF SRPDYKYANS PRCNRATEKG FWKITGKTRQ VKSRQLPKSV TCKKRTLTFH 240 EGRVSKSRNT GWVRQEYYLT PTGPGSNPNQ LSGFVLCRMK NKSTDNESDN KKQQDVSICV 300 ESADPGIAGC MASNSELDQA AGIHLITDAD EHLTYKELEH VLLGSGNQND GEPGGFVSSD 360 FDDMIQELCA KGGEYLDLPS PPPEPPRQHQ LPQLGNVPVT GDYFGSNSND QAAAINHMIP 420 DPEELLAYKE LERVLGSCNP DDDEPGGCVS SNMLQKLCAQ LGEELDSPIP PPGPSELGNV 480 PYVYTDECSS WPSPTGDNDS SLPNKNSIPT NYDSKQVSNT ASNFENQTRS SEIYSQAEEN 540 WESFFRQFEL EDYILPIVPR TGRFLHANNY IGCNELQSAA LFPQSS

Sequence ? help Back to Top

Protein Sequence Length: 586 aa Download sequence

MISVDEDHVW EEYVKSHDDA RGFRFKVIEH WDDIVDLCGK NSATGWHAET GADAIEVMTP  60
PTNEVEHVEL DGDTQAEGGM SSSMSTTEES VLDLLPKFRF HPSEEEMVNL LKNKVNGQDS  120
QAMPDEIVDK PWDLPDNESI QLFGRFLKRM MQGKASQSIP EIDVYKYEPW DLAELMFPDS  180
PYQPRAWFSF SRPDYKYANS PRCNRATEKG FWKITGKTRQ VKSRQLPKSV TCKKRTLTFH  240
EGRVSKSRNT GWVRQEYYLT PTGPGSNPNQ LSGFVLCRMK NKSTDNESDN KKQQDVSICV  300
ESADPGIAGC MASNSELDQA AGIHLITDAD EHLTYKELEH VLLGSGNQND GEPGGFVSSD  360
FDDMIQELCA KGGEYLDLPS PPPEPPRQHQ LPQLGNVPVT GDYFGSNSND QAAAINHMIP  420
DPEELLAYKE LERVLGSCNP DDDEPGGCVS SNMLQKLCAQ LGEELDSPIP PPGPSELGNV  480
PYVYTDECSS WPSPTGDNDS SLPNKNSIPT NYDSKQVSNT ASNFENQTRS SEIYSQAEEN  540
WESFFRQFEL EDYILPIVPR TGRFLHANNY IGCNELQSAA LFPQSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	4e-28	NAC family protein