PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g109960.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 249aa    MW: 28038.2 Da    PI: 8.5918
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g109960.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY109.21.9e-3494151259
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dgy+WrKYGqK vk+s+fprsYYrCts+ C+vkk+vers +dp++v++tYeg+H+h+
  Pd.00g109960.m01  94 EDGYRWRKYGQKAVKNSPFPRSYYRCTSTACNVKKRVERSFNDPSIVVTTYEGQHTHP 151
                       8********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MDVKKDVVKM EDNSTNIGYT IYPATPNSSS ISSASSEALN EEQTENKGAA DQDEEEEHDQ  60
PKTKKELKAK KASQKRQREP RFAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT  120
STACNVKKRV ERSFNDPSIV VTTYEGQHTH PSPLIPRPTL TASASVQPNI STTFAMPSMP  180
RTLLSHHYQH QLQPFNFCNY VNGGSPTANA SSTGFHHERR FCTPATGSAM LTDHGLLQDI  240
VPSHMLKQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.11e-60WRKY family protein