PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1100430.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 196aa    MW: 21943.4 Da    PI: 4.6795
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1100430.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB175.94.1e-5558154197
              NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 
                        vreqdrf+Pianv+rim+k+lP +akis+daket+qecvse+isf+t+ea+++cqre+rkti+++d+lwa+++lGf+dy+epl++yl++yre
  Pd.00g1100430.m02  58 VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRE 149
                        69****************************************************************************************** PP

              NF-YB  93 legek 97 
                        +ege+
  Pd.00g1100430.m02 150 MEGER 154
                        ***97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MRLAEMNQFS LQQGGKSTSS STTNININNV VSNNNNNVNH STSSNGTTTT TDDNECVVRE  60
QDRFMPIANV IRIMRKILPP HAKISDDAKE TIQECVSEYI SFITGEANER CQREQRKTIT  120
AEDVLWAMSK LGFDDYIEPL TLYLHRYREM EGERGSGSST TSVMRSDTSM IVENSAASSD  180
IPGIEEQKFV ANTFVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.21e-62NF-YB family protein