PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1101630.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 233aa    MW: 27101 Da    PI: 5.0019
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1101630.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.45.9e-192272253
                NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka 53
                        pGfrFhPtdeelv +yL++kve+k +++ e ik++diyk++PwdLpk+++ 
  Pd.00g1101630.m01 22 LPGFRFHPTDEELVEFYLRRKVEKKAISI-ELIKSIDIYKHDPWDLPKAINI 72
                       59***************************.89***************74433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MDSNYTSTKD DHQYIDEDDV QLPGFRFHPT DEELVEFYLR RKVEKKAISI ELIKSIDIYK  60
HDPWDLPKAI NIHRGSNTKN INSTDPQQEA EIWTLCRIFK RNVSYKKYTA DWRGLSGAKR  120
HPMDTVSSKK CTSDQDDLDQ SNNYISFGAS DNIICYEEKK PVVNHTNMNN FNGNNQQLHA  180
VGQLSSNMPA TYPYMETFSN FSYQDLENEL LNENWDELRS AAIHLAFDPT FLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.13e-23NAC family protein