PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1103350.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 246aa    MW: 28107.4 Da    PI: 4.3437
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1103350.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM34.18.2e-11118851128
                NAM  51 vkaeekewyfFskrdkkyatgkrknratk...sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++++++++y F++ +kk+++g+r  r++    +g+Wk   + k++ +  g+++g++k + + +  +p+    +W+m e++l
  Pd.00g1103350.m01  11 ITSDQEDIYVFTTLKKKTPNGSRFCRTVGaagTGVWKGEDSGKKIRA-CGNDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 88 
                        45677899******************643344999***********9.999***********655555..89*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MGDMERFPPL ITSDQEDIYV FTTLKKKTPN GSRFCRTVGA AGTGVWKGED SGKKIRACGN  60
DIGIRKRFRY MNPGSPHDDR WIMLEFQLDE SLVQVPNKET IVLCLVRKKE TSGKSKLEER  120
QNHEVDMASR EEIQAQHVHD DQQQHIDAST YDQLRFLDDY LMNDVGGEQN TMVNPSLLAQ  180
YDQQDMIGSS TEDQLRVLED FLMNDVEGEQ DTMVNPALLA QYGQQGTSIE DQLKFLEDYL  240
MSDIEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.12e-10NAC family protein