PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1103550.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 248aa    MW: 29000.6 Da    PI: 6.8767
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1103550.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM77.92.3e-2461411128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkk........leleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknra...tks 80 
                        +p+G++F+P+ eel  +yL ++v+g+k        ++l   ++e+d+y +ePw++ ++++  +++++y F++ +kk+++g+r  r+   t +
  Pd.00g1103550.m01   6 VPVGYKFRPSAEELFLDYLFPRVNGNKypgrvvpeCDL-YSVPECDLYGAEPWEIWRNFHRdDQEDIYVFTTLKKKTPNGSRYCRTvgaTGT 96 
                        599************************77777533222.259*************855555155588****************995455889 PP

                NAM  81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        g+Wk   + k++ + +g+++g+kk + +   ++p+++  +W+m e++l
  Pd.00g1103550.m01  97 GIWKGEDSGKKIRA-GGRDIGIKKRFRYM--NRPSPQDDRWIMLEFQL 141
                        *************9.9************9..6788889********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MGGYQVPVGY KFRPSAEELF LDYLFPRVNG NKYPGRVVPE CDLYSVPECD LYGAEPWEIW  60
RNFHRDDQED IYVFTTLKKK TPNGSRYCRT VGATGTGIWK GEDSGKKIRA GGRDIGIKKR  120
FRYMNRPSPQ DDRWIMLEFQ LDKSLVQVPN QNPIVLCLVR KKETSSKLEK RETQEVDMPS  180
RGEIHAQHVH DDQQQHIDAS NHDRLRAIND YLLNDDTMVN PNFLAQYRHP GTITEDEIRR  240
YEDNLTYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.15e-19NAC family protein