PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1103560.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 246aa    MW: 28649.1 Da    PI: 6.2455
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1103560.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM85.78.9e-2761341128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknratksgyWka 85 
                        +p+GfrF+Pt+eel+  yL ++v+g+k ++  vi+e+d+y + ePw++ +    +  +  +++++y F++ +kk+++g+r  r++ +g+Wk 
  Pd.00g1103560.m01   6 VPVGFRFRPTEEELLRSYLSPRVNGNKYPE-GVIRECDLYGAkEPWEIWRdfhhS--SpdDKEDIYVFTTLRKKTPNGSRFCRTVGTGIWKG 94 
                        599************************999.99*******8769****7423322..24355588*************************** PP

                NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                          + k++ + +g+++g+kk + + +  +p+    +W+m e++l
  Pd.00g1103560.m01  95 EDSGKKISA-RGRDIGIKKRFRYMNPGSPH--DDRWIMLEFQL 134
                        *******99.999***********655555..89*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MAGYQVPVGF RFRPTEEELL RSYLSPRVNG NKYPEGVIRE CDLYGAKEPW EIWRDFHHSS  60
PDDKEDIYVF TTLRKKTPNG SRFCRTVGTG IWKGEDSGKK ISARGRDIGI KKRFRYMNPG  120
SPHDDRWIML EFQLDKSLVP VPNPETIVLC LVRKKETSGK RKLEERETHE VDMPSRGEIQ  180
AQHVHDDQQQ HIDASNYDQL RALEDFLLSD VEGEQDTMVN PNFLAQSAGH NTEDHLRSYM  240
DYLMYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.11e-23NAC family protein