PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1107550.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 283aa    MW: 32271.2 Da    PI: 8.3368
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1107550.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1652.1e-2084174190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                        +fY++YA  +GFs+r+s+ ++s + g ++ r++vCskeg+r+++ ++ ++  r++r+etr +C+a++ vk    ++ + +tk+++eH H la
  Pd.00g1107550.m01  84 RFYCNYALAIGFSIRRSRLRRS-KGGVVMGRQWVCSKEGSRSKKWTNrDDMVRTPRKETRENCHATFAVKYCPkRDAYIMTKFVKEHIHRLA 174
                        5********************9.8889***************9988846677889*****************9899*************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MEAETSKTNG IQGQNSVPNS EGYFAEAESL EETENVPSLQ ILDSRTEEST EKSGQFEYDG  60
LNFQNMSIAD FAEREFAKVE EAERFYCNYA LAIGFSIRRS RLRRSKGGVV MGRQWVCSKE  120
GSRSKKWTNR DDMVRTPRKE TRENCHATFA VKYCPKRDAY IMTKFVKEHI HRLANSREVS  180
FLRSHRCVTE SNIAQSMYMR KASIKTNRTY DYMVDQACGY IKVGFTSKDL YNRMDFERRQ  240
VVLNGDAQAS ISYMNAKAIA DPELSTSTLP VSGSTDLSTS TLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-19FAR1 family protein