PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g111070.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 245aa    MW: 26302 Da    PI: 4.9387
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g111070.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.99.2e-16178214135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++Cg  +  Tp++Rrgpdg++tLCnaCGl+++ kg+
  Pd.00g111070.m01 178 CRHCGINEkcTPMMRRGPDGPRTLCNACGLMWANKGT 214
                       **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MDDICGSDEP MHMNDNLHLQ YMQEHEHHHG LDHISNVNGV ADDHDNGSGG AELVQADVPS  60
DPMNLSDTRD GMMNHGPENG DQLTLSFQGQ VFVFDCVSPE KVQAVLLLLG GSEVPPSMPA  120
TQHTNRVAEL GLKMQRKKGQ FTSSKPNNDD SASAVTSSGS NGSWSQDGNG SQHQEAVCRH  180
CGINEKCTPM MRRGPDGPRT LCNACGLMWA NKGTLRDLSK ASEAAAPQAG QNPSVSKSED  240
MKPDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.21e-84GATA family protein