PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1111170.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 221aa MW: 24706.9 Da PI: 9.5288

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1111170.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.9	8.7e-33	142	200	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk++ +prsYYrCt+++C+vkk+v+r ++d+++v++tYeg+Hnh+ Pd.00g1111170.m01 142 LDDGYRWRKYGQKAVKNNLYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGTHNHP 200 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MEGHQEPTYP PPLTPSSLIS LPFLLPPQNP LFTPSSASTA PSSSSQLISP PLLEPQQHQV 60 LPDIDWVSLL SGSPAAGFDG QEINNYKPLV ENNNVGASAE NINEADREGK GANSKRKGGG 120 RMRKPASRPR FAFQTRSADD ILDDGYRWRK YGQKAVKNNL YPRSYYRCTH HTCNVKKQVQ 180 RLSKDTSIVV TTYEGTHNHP CEKLMETLTP LLKQMQFLSR F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46130.1	1e-56	WRKY family protein