PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1114030.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 141aa    MW: 16193.8 Da    PI: 4.644
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1114030.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.4e-05119135117
                        EEETTTTEEESSHHHHH CS
            zf-C2H2   1 ykCpdCgksFsrksnLk 17 
                        ++C+ C k+F+r  nL+
  Pd.00g1114030.m01 119 FSCHVCFKTFNRYNNLQ 135
                        89************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MEPSEFSSSS SPFFSANDHV ETLNLFPNYE TPNAHLEPLP SCLLRSPEHQ VPNSHDQNPK  60
ACNEDHKEDE VTVALHIGLP EYSDGSVNYL NEKEDENNVT AQKYWIPTPE QILIGFTHFS  120
CHVCFKTFNR YNNLQVRLQV F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34790.14e-23C2H2 family protein