PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1114930.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 81aa    MW: 9017.14 Da    PI: 8.3759
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1114930.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP71.61.4e-223681247
                       -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTS CS
                SBP  2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCs 47
                       Cq+++C+adls+ak+y+rrhkvC vh+kap+v v g++qrfCqqCs
  Pd.00g1114930.m01 36 CQADDCNADLSDAKQYYRRHKVCGVHAKAPAVRVGGVQQRFCQQCS 81
                       *********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MNETKTKIKF WDEPSQIECQ SSSSLVYGGS MARPSCQADD CNADLSDAKQ YYRRHKVCGV  60
HAKAPAVRVG GVQQRFCQQC S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.12e-20SBP family protein