PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1115320.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 194aa MW: 22008.1 Da PI: 8.4747

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1115320.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	105.7	3.7e-33	19	116	2	102
HHHHHHHHHC......TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXX CS HSF_DNA-bind 2 Flkklyeile......deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFk 87 Fl+k+y++le ++ k+++sw+++g+ f+v+ + ef++ +LpkyFkh+nf+SF+RQLn+YgFkk++ ++ weFkh++F+ Pd.00g1115320.m01 19 FLSKTYDLLEegaaeeGDSGKKIVSWNAEGSGFIVWSPAEFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSPKQ---------WEFKHEKFQ 101 9*******66555444899*********************************************9988.........***** PP XXXXXXXXXXXXXXX CS HSF_DNA-bind 88 kgkkellekikrkks 102 kg +++l +i rkk Pd.00g1115320.m01 102 KGCRHMLVEITRKKC 116 **********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MAATTSSGQS PRTRSPAPFL SKTYDLLEEG AAEEGDSGKK IVSWNAEGSG FIVWSPAEFS 60 ELLLPKYFKH NNFSSFIRQL NTYGFKKTSP KQWEFKHEKF QKGCRHMLVE ITRKKCEPSA 120 FPVYLKASEE SGSGNTAVAA AEENNCLLLM EENKNLRKQK LELQMQISQF KALEMKLLDC 180 LAQNMEDHQN KARC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36990.1	1e-39	HSF family protein