PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1116730.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 199aa    MW: 22705 Da    PI: 5.2102
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1116730.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.6e-053877555
                       HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       +  +ErrRR+++ +++ +Lr l+            Ka+i+e A+ YI++Lq
  Pd.00g1116730.m01 38 NLHAERRRRQKLSERLLTLRALMN-----------KATIVEDAITYIHELQ 77
                       5579****************9975...........559***********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MEFVASALDE LCITEQGKRG GRMGHRSHNN DDEYKSKNLH AERRRRQKLS ERLLTLRALM  60
NKATIVEDAI TYIHELQKTV NILKDQLFDM EASEEEALEP KKEEIQAQEE MKKFGIQAGV  120
NVTQMDGNKL WLKAIFEKKR GGFTKLMEAM TAFGFELTDT SVTTSNGAML VSSCVMGFYC  180
ETLEVEQTKE LMLEIINSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.11e-39bHLH family protein