PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1117140.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 122aa    MW: 13812.7 Da    PI: 7.1778
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1117140.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP27.67.4e-09131939
                       ---TT--HHHHHTT--HHHHT-S-EEETTEE CS
                SBP  9 adlseakeyhrrhkvCevhskapvvlvsgle 39
                       +dls+ ++yh+rh vC++hsk+p+++v+g+e
  Pd.00g1117140.m01  1 MDLSSSQDYHERHIVCDTHSKTPKAIVNGIE 31
                       59*************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MDLSSSQDYH ERHIVCDTHS KTPKAIVNGI EVNVTTSEEK TVDEEPLVYA NKQEAKNAFK  60
ALLESANVHS DWTWEQVAWL FHSYYHHLLL LKSLLRAIPA ISPCQGRRGP KPQKCLPASQ  120
SC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27370.31e-09SBP family protein