PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1118950.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 196aa    MW: 22117.2 Da    PI: 6.3481
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1118950.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.34.2e-30106164159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        +dDg++WrKYG+K+vk+s++pr+YY+C+s gC+vkk+ver++ed ++v++tY g Hnhe
  Pd.00g1118950.m01 106 MDDGFKWRKYGKKSVKNSPNPRNYYKCSSGGCNVKKRVERDREDSSYVITTYDGVHNHE 164
                        59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MDCLQNPNPS SAGPYHFGES IDPSMDFDEF SDYFMLDCGD DDHQDSSSLS TVSPEKFRAD  60
CSTESSGGAT SRNSNNNMKC RNEGRRNKIE MGHRVAFRTK SELEVMDDGF KWRKYGKKSV  120
KNSPNPRNYY KCSSGGCNVK KRVERDREDS SYVITTYDGV HNHESPCVVY YNQMPPPVDP  180
NNIWTLRASS QSSASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.15e-53WRKY family protein