PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1120330.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 1081aa MW: 121315 Da PI: 7.413

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1120330.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.8	1.3e-21	655	740	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfYn+YA+ vGFs+r+sk +k+ + g+ +r fvCs egkre++k + + +++raetr gC a++k++ + ++k++vt+++ eH+H Pd.00g1120330.m01 655 KFYNAYAYGVGFSIRRSKFRKE-KCGKLRDRLFVCSAEGKREKNKCD-GSVKSHRAETRFGCLARMKISCRLNDKYCVTEFVPEHTHV 740 6***************9998.6677**************99.9999*********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 1081 aa Download sequence
MGKIGCTQPR RVAAMSVAKR VAEEFGCRLG EEVGYAIRFE DCTGPDTIIK YMTDGMLLRE 60 ILIDENLSQY SVVMLDEAHE RTIHTDVLFG LLKKLVKRRP DLRLIVTSAT LDAEKFSGYF 120 FNCNIFTIPG RTFPVEILYT KQPESDYLDA SLITVLQIHL TEPEGDILLF LTGQEEIDFA 180 CQSLYERMKG LGKNVPELII LPVYSALPSE MQSRIFDPAP PGKRKVVVAT NIAEASLTID 240 GIFYVIDPGF AKQNVYNPKQ GLDSLVITPI SQASAKQRAG RAGRTGPGIC YRLYTESAYR 300 NEMSPTSIPE IQRINLGTTT LTMKAMGIND LLSFDFMDPS SPQALISAME QLYSLGALDE 360 EGLLTKLGRK IAEFPMDPPL SKMLLASVDL GCSDEILTII AMIQTVYEAW KAKNFSGPWC 420 FENFVQSRSL RRAQDVRKQL LSIMDKSREL GMPLAVSSSS LQNPANVVFL AKPTEPSSSL 480 LIPASVVFSA RVFSSSPIAA NERRLPCKNQ PYPLSSLIIS TSSPPSTLKR LQNPILLPHN 540 LCLEIAAPLN QPIIPFVEAP WMEKFKSYKL RAANFVKDMN GENNYRDDDG TQASLKLIFE 600 TGVDFNAFAG SESNEEKLSE TTQGNENIEL IHSNMQKKLI PVIGMEFETE EEAFKFYNAY 660 AYGVGFSIRR SKFRKEKCGK LRDRLFVCSA EGKREKNKCD GSVKSHRAET RFGCLARMKI 720 SCRLNDKYCV TEFVPEHTHV TSSPCKTHFF RSHKNMSLAQ IVEADMADSS GIAPKATLEL 780 LSRQAGGRQN LGFIPVDYKN YLRSKRTREM RRLVEDRRYQ ELKAEFRASQ SSPALSFPVE 840 ILKHASNIYT PEVFKLFQDE LCKAHDCVLK FNGEIGSISK YEVIPHKKYW DHTVTFDTID 900 NTVLCSCKKY EFAGILCAHA LKVLSTRNIK SIPAQYILKR WTKNIKAKSA KSTCNVSSEN 960 DLKVEIVRRY RELCRLHTQL ATRASESKDA YETAIVGLNN TLRDVDACLK KKASQEPTQE 1020 PDSHNETIHM PTQSQATMDI SQAELPQEEE LSLLSSEGLD LLSSELTCSA KTHDMDVQDV 1080 E

Sequence ? help Back to Top

Protein Sequence Length: 1081 aa Download sequence

MGKIGCTQPR RVAAMSVAKR VAEEFGCRLG EEVGYAIRFE DCTGPDTIIK YMTDGMLLRE  60
ILIDENLSQY SVVMLDEAHE RTIHTDVLFG LLKKLVKRRP DLRLIVTSAT LDAEKFSGYF  120
FNCNIFTIPG RTFPVEILYT KQPESDYLDA SLITVLQIHL TEPEGDILLF LTGQEEIDFA  180
CQSLYERMKG LGKNVPELII LPVYSALPSE MQSRIFDPAP PGKRKVVVAT NIAEASLTID  240
GIFYVIDPGF AKQNVYNPKQ GLDSLVITPI SQASAKQRAG RAGRTGPGIC YRLYTESAYR  300
NEMSPTSIPE IQRINLGTTT LTMKAMGIND LLSFDFMDPS SPQALISAME QLYSLGALDE  360
EGLLTKLGRK IAEFPMDPPL SKMLLASVDL GCSDEILTII AMIQTVYEAW KAKNFSGPWC  420
FENFVQSRSL RRAQDVRKQL LSIMDKSREL GMPLAVSSSS LQNPANVVFL AKPTEPSSSL  480
LIPASVVFSA RVFSSSPIAA NERRLPCKNQ PYPLSSLIIS TSSPPSTLKR LQNPILLPHN  540
LCLEIAAPLN QPIIPFVEAP WMEKFKSYKL RAANFVKDMN GENNYRDDDG TQASLKLIFE  600
TGVDFNAFAG SESNEEKLSE TTQGNENIEL IHSNMQKKLI PVIGMEFETE EEAFKFYNAY  660
AYGVGFSIRR SKFRKEKCGK LRDRLFVCSA EGKREKNKCD GSVKSHRAET RFGCLARMKI  720
SCRLNDKYCV TEFVPEHTHV TSSPCKTHFF RSHKNMSLAQ IVEADMADSS GIAPKATLEL  780
LSRQAGGRQN LGFIPVDYKN YLRSKRTREM RRLVEDRRYQ ELKAEFRASQ SSPALSFPVE  840
ILKHASNIYT PEVFKLFQDE LCKAHDCVLK FNGEIGSISK YEVIPHKKYW DHTVTFDTID  900
NTVLCSCKKY EFAGILCAHA LKVLSTRNIK SIPAQYILKR WTKNIKAKSA KSTCNVSSEN  960
DLKVEIVRRY RELCRLHTQL ATRASESKDA YETAIVGLNN TLRDVDACLK KKASQEPTQE  1020
PDSHNETIHM PTQSQATMDI SQAELPQEEE LSLLSSEGLD LLSSELTCSA KTHDMDVQDV  1080
E

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	669	676	RRSKFRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-24	FAR1 family protein