PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1121090.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRF

Protein Properties

Length: 314aa MW: 34831.1 Da PI: 9.2134

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1121090.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	72.9	3.6e-23	54	98	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH++rgr rsrk +e+ Pd.00g1121090.m01 54 DPEPGRCRRTDGKKWRCSKDAHPDSKYCERHMNRGRYRSRKLVES 98 79***************************************9986 PP
2	QLQ	31.2	7e-12	1	26	11	36
QLQ 11 LksQilAyKyLaanqPvPpeLlqaiq 36 +++Q+l++KyL a++PvPp+Ll +i+ Pd.00g1121090.m01 1 MEHQALIFKYLKAGLPVPPDLLGPIR 26 69********************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MEHQALIFKY LKAGLPVPPD LLGPIRTSFN LISSNFLRHH PTLGYTSYCG KKIDPEPGRC 60 RRTDGKKWRC SKDAHPDSKY CERHMNRGRY RSRKLVESQT TSQSSSTVTS DSVIGSSSHS 120 GSFQNMPLHS MVNSGGLCFG SNVSQLKMEP IPYGIGNSGN RGRSGAEEHN FMSEPSGSVK 180 CLGMDSTVDS PWHLMVPRVS LKSEPKNCSL LLNNSSQLQT LQHTEPLTVD TAITKQQQHQ 240 YVGGQFGFPG SLKHEQNSLQ PFFDEWPKSR DLGFHLSDHR STNTLTATQL SMSNTMAPTK 300 FFARSADSPT DAYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-34	GRF family protein