PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1121570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 161aa    MW: 17332.3 Da    PI: 4.4676
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1121570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix77.81.6e-2438120186
           trihelix   1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                        +W  +e+++Li++r e+e r ++ +k+ k+lWe+vs+km+ergf+r+p+qCk+kw+nl  ryk  ++++ +    s ++cp+f++l+
  Pd.00g1121570.m01  38 QWAPEETRELIAIRGELEIRNSNlAKRSKALWEAVSSKMAERGFNRTPEQCKCKWKNLLIRYKGKETSDPE----SGRECPFFEELQ 120
                        7*****************9988768999************************************9999997....4667******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MYGAGGDEEE GMGMGMGSGG AGLMKKMMTS PAGGGSGQWA PEETRELIAI RGELEIRNSN  60
LAKRSKALWE AVSSKMAERG FNRTPEQCKC KWKNLLIRYK GKETSDPESG RECPFFEELQ  120
AVFTERANNM QRLLLESETA AEDGDGVEGN DGEAGTGAAD V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.16e-30Trihelix family protein