PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1123030.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 206aa    MW: 22322.5 Da    PI: 8.7195
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1123030.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP27.45.5e-09131164134
            E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeL 34 
                        r ++sL+llt+kf++l++++e+gi++ln++a++L
  Pd.00g1123030.m01 131 RFDSSLGLLTKKFINLFKHAEDGILDLNNAADTL 164
                        6789*****************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MSSITALKFR EIGVFLVDQG GPDLSLTEDG CKLPLSTCSD ALRSVSRRGG WWWLKRKSDA  60
ADYEAESSDR TAAPGYTEAV TSPFQTPVSS KVGKANKTSR LTKCSRSGPQ TPASNVGSPS  120
GPNLTPAGPC RFDSSLGLLT KKFINLFKHA EDGILDLNNA ADTLELVNIA KVVMVCSKSY  180
LQTVIAYDIR MPHTDFLIKY KTVLLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.31e-29E2F/DP family protein