PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1128530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 258aa    MW: 29449.5 Da    PI: 8.5905
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1128530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.63.9e-12132238198
                        EEEE-..-HHHHT.T-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEE CS
                 B3   1 ffkvltpsdvlks.grlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFk 83 
                        f+k+l  sdv  + +rl++ k+ +e++       g++ +e++++t +d  g+++ + ++++ ++  +vlt+GWk F+++ +L    Dfv++ 
  Pd.00g1128530.m01 132 FEKQLALSDVRDNqCRLSMNKEDVENNimpllrnGENLNEGIDVTTYDMAGNEYPMVFKVWATK-VHVLTGGWKTFCNDLRLVeNQDFVTLW 222
                        89999999998887**********999******966677999****************999997.789*************98578999987 PP

                        E-SS.SEE..EEEEE- CS
                 B3  84 ldgr.sefelvvkvfr 98 
                          ++ +++ l++ +++
  Pd.00g1128530.m01 223 IFRHvDNGGLCFAIYS 238
                        5555567767777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MASREDREDT GYGDGMTTSS TEEGAYLLLH LKHTILNPET ARNLEHMKSK ILSGIKLKSP  60
SGSKRKALRI QEPEAPQARE ATNGAARGRS LPRELQFQQE ERGGLFYGNY TPPDLPPIPS  120
LQNLIQDCSK PFEKQLALSD VRDNQCRLSM NKEDVENNIM PLLRNGENLN EGIDVTTYDM  180
AGNEYPMVFK VWATKVHVLT GGWKTFCNDL RLVENQDFVT LWIFRHVDNG GLCFAIYSRR  240
LPVFEPIKKK RPIRKNYH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03170.13e-28B3 family protein