PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1128540.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 270aa    MW: 30915.1 Da    PI: 6.785
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1128540.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.59.8e-13144250198
                        EEEE-..-HHHHT.T-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEE CS
                 B3   1 ffkvltpsdvlks.grlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFk 83 
                        f+k+lt+sdv +  +rl++ k+ +e++       g +  e++++t +d  g+++ + ++++ ++  +vlt+GWk F+++ gL    Dfv++ 
  Pd.00g1128540.m01 144 FEKQLTRSDVKEDqCRLSMNKEDVENNimpllrnGDNLYEGIDVTTYDMAGNEYPMVFKIWATK-VHVLTGGWKTFCNDLGLVeYQDFVTLW 234
                        99*********988**********999****99866666999****************999997.789**************8568999887 PP

                        E-SS.SEE..EEEEE- CS
                 B3  84 ldgr.sefelvvkvfr 98 
                        + ++ +++ l++ +++
  Pd.00g1128540.m01 235 VFRHvDNGGLCFAIYS 250
                        6655567767777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MMFTNEGESN RPGMTSQEDH EEPGCGDGEM TNGTEGAYLL LFLKHTILNP ETARDLEHMK  60
SKILSGIELN SPSRSKRKAL RIQEPEAPRA RESTNGAARG RSLPRELQFQ QQERGGLFYG  120
NYTPPDLPPI PSLQNLIQDC SKPFEKQLTR SDVKEDQCRL SMNKEDVENN IMPLLRNGDN  180
LYEGIDVTTY DMAGNEYPMV FKIWATKVHV LTGGWKTFCN DLGLVEYQDF VTLWVFRHVD  240
NGGLCFAIYS RRLPVFEPIK KKRPLRKNYH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03170.17e-30B3 family protein