PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1130150.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Nin-like
Protein Properties Length: 372aa    MW: 42071 Da    PI: 4.4494
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1130150.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK78.28.8e-25284334252
             RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                        +++++l+dl+ y +lpi++AA+ L+vc+Tv+KriCR++G++RWP+Rki+s+
  Pd.00g1130150.m01 284 TANMTLDDLRDYVHLPIEKAARRLNVCPTVVKRICRRNGLRRWPSRKITSI 334
                        789*********************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MADPRAVVPY HDPYDSGPYT EIMNLLNDSE HPRIDENNIP PLEGSLASPN PTPMFDEEIQ  60
DVDEPLMDQA MWDFIYGSDN GGEGINSQAG PSQIFTESSG TNPPRGDGNE QNHGFGNVRP  120
LSVWSLPSDP INCTFCQVFR EIVHFNSDNV MKLEIHGRLG VICHAILQSR PNANVNSSGN  180
HQYQMLDFCK TPGEEVKQFL MQYCLERKLE GYIMQQDPLT FFYEALCVGV DWDAILNPTD  240
DFDFPPSPPD SGDMEKPAAV QPEAAEHEIE TNPRISLAEQ RERTANMTLD DLRDYVHLPI  300
EKAARRLNVC PTVVKRICRR NGLRRWPSRK ITSINRQISR LRPSLDSDDA ETRVHAEAEI  360
SRLEREIAEL VP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.11e-14Nin-like family protein