PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1133720.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 200aa    MW: 23041 Da    PI: 4.8971
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1133720.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.22.1e-33391693128
                NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkdk 90 
                        +G+rF+P+++++vv+yL +k+ g++l+++++ike+ +y+++P +Lp    k+  + +e ++F+ +++ y++ gk ++r+tksgyW   g+++
  Pd.00g1133720.m01  39 VGYRFDPSEDQIVVFYLFNKILGRELPINDIIKEISVYDHDPDELPsGdfKHGLDCNEAFYFAYTEQVYSSrGKMTRRTTKSGYWDLDGEEE 130
                        7*********************************************5444444467799********99963778888************** PP

                NAM  91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ev+ + ++ +vg  k++vf+kg+ap+g +td +mheyr+
  Pd.00g1133720.m01 131 EVKYRnGDITVGFEKVMVFHKGTAPNGIETDFIMHEYRV 169
                        **99856677***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MALPSPQSTS QVPETEKDFD LLKCSKIENG KKEAEIHLVG YRFDPSEDQI VVFYLFNKIL  60
GRELPINDII KEISVYDHDP DELPSGDFKH GLDCNEAFYF AYTEQVYSSR GKMTRRTTKS  120
GYWDLDGEEE EVKYRNGDIT VGFEKVMVFH KGTAPNGIET DFIMHEYRVN PLIVPTHVLN  180
DSVRAKIERY VVCRIIHEGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.12e-28NAC family protein