PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1134170.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 249aa    MW: 27634.1 Da    PI: 4.7397
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1134170.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP26.79.3e-0984118138
            E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsed 38 
                        r ++sL+llt+kf++l++++e+gi++ln++a++L   +
  Pd.00g1134170.m01  84 RFDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---E 118
                        6789*****************************9...3 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MVLVTDLKRK SDAADYEAES SDRTAAPGYT EAVTSPLQTP VSSKVGKANK TSRLTKCSRS  60
GPQTPASNVG SPSGPNLTPA GPCRFDSSLG LLTKKFINLI KHAEDGILDL NNAADTLEVT  120
TFLSVVMFEK QDGVVLMATT GNLKQIDEAL QRPGRMDRDE DNKEKEAARF AQLWNKIISS  180
FREEDLISDS EEELKGSNGL DEDLRLWASY RGQTLTRTVR GMMYYRKALE LQAFLDMAQD  240
DDLLLFRWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.33e-31E2F/DP family protein