PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1135820.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 298aa    MW: 34414.5 Da    PI: 4.9271
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1135820.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.63.6e-2171402128
                NAM   2 ppGfrFhPtdeelvveyLkkkvegkk....leleevikevd.iykvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWk 84 
                        p GfrF+Ptd+el++++L kkv +k+       +++++e++ + ++ePw    ++ +    ++++yfFs+ ++ +++gkr +r + + g+W+
  Pd.00g1135820.m01   7 PLGFRFRPTDQELLSYFLYKKVITKDplmaSYYSNIVHEFNfLGETEPWVVWDQFGGpglVDEDLYFFSELKTLSQKGKRIKRkIEAGGTWS 98 
                        78*******************9999977643334579999736799*****74443333367899******************5555899** PP

                NAM  85 atgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        +  + k++++k +g+ +g k+ L + +  ++  ++ +W+++ey+l
  Pd.00g1135820.m01  99 EAFS-KKIYDKtTGNPIGQKRNLRYEN--QECEHHGKWLLEEYSL 140
                        8877.66776658999********984..4444699*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MANNNRPLGF RFRPTDQELL SYFLYKKVIT KDPLMASYYS NIVHEFNFLG ETEPWVVWDQ  60
FGGPGLVDED LYFFSELKTL SQKGKRIKRK IEAGGTWSEA FSKKIYDKTT GNPIGQKRNL  120
RYENQECEHH GKWLLEEYSL LDKEAQKIVL CRLKKNSRVS NKRNNSTQEF KEKPSNKKAR  180
KELASATVKI DDEEPQRSSS LSSVVNNHDQ ELIFDINYNA ISNYLCSDDQ DNINDPFDYG  240
CVTDEEYAIG MDALLGTPPL SQELPHMAET LQVEAMNSSG LENICNQQLD DITYWFNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-11NAC family protein