PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1136250.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LFY
Protein Properties Length: 788aa    MW: 88131.5 Da    PI: 9.5502
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1136250.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY578.31.9e-17613771367
            FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseap.leaaaaaaark...lreleelfkayGvryltvakiaelGftvstLvdmkdeeldd 88 
                        mdp+afsaslfkwd r ++++p+ r++ eaav+++  ++aaa aa r+   l++le+lf+ayGvry+t+akiaelGftv+tL+dm+d eldd
  Pd.00g1136250.m01   1 MDPDAFSASLFKWDLRGMVVPPS-RAQLEAAVTPQGaAAAAAYAAVRSpreLEGLEDLFQAYGVRYYTAAKIAELGFTVNTLLDMRDGELDD 91 
                        9**************99887766.454555454444123333333333222669************************************** PP

            FLO_LFY  89 lmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet..aldalsqeglseepvqeekeaagsggeglgeaelvaaee 178
                        +m+sls+ifr+dllvGeryGikaavraerrrl++ +  ++rr+++s d++t  aldalsqeglseepvq+eke++gsgg+ + eae++a e+
  Pd.00g1136250.m01  92 MMSSLSQIFRWDLLVGERYGIKAAVRAERRRLDDVD--SRRRHTVSGDTTTtnALDALSQEGLSEEPVQQEKEMVGSGGGAAWEAEAAAGEK 181
                        **********************************87..8888899888766569************************99965555555554 PP

            FLO_LFY 179 kkseeekkkaskkkqkrkkkkelkse............ededeeeeededeegsgedge...erqrehPfivtepgevargkknGLDYLfdL 255
                        +k++++++k +  +    + +                 ++ed+++ +d +++g+g++g    er+rehPfivtepgevargkknGLDYLf+L
  Pd.00g1136250.m01 182 RKKQRRTRKGQY-R----NFNG---VggghnndhnegvDNEDDNDIDDMNRHGNGAGGGlptERRREHPFIVTEPGEVARGKKNGLDYLFHL 265
                        333333222222.1....1111...1112223344454455555556666666666665667****************************** PP

            FLO_LFY 256 yeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvai 347
                        yeqCr+fL+qvq+iakerGekcPtkvtnqvfr+akkagasyinkPkmrhYvhCYalhcLdeeasnalrr fkergenvGawr+acykplvai
  Pd.00g1136250.m01 266 YEQCRDFLIQVQNIAKERGEKCPTKVTNQVFRFAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWREACYKPLVAI 357
                        ******************************************************************************************** PP

            FLO_LFY 348 aarqgwdidavfnahprLsi 367
                        aa qgw+ida+fn+hprLsi
  Pd.00g1136250.m01 358 AAGQGWEIDAIFNSHPRLSI 377
                        *******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 788 aa     Download sequence    
MDPDAFSASL FKWDLRGMVV PPSRAQLEAA VTPQGAAAAA AYAAVRSPRE LEGLEDLFQA  60
YGVRYYTAAK IAELGFTVNT LLDMRDGELD DMMSSLSQIF RWDLLVGERY GIKAAVRAER  120
RRLDDVDSRR RHTVSGDTTT TNALDALSQE GLSEEPVQQE KEMVGSGGGA AWEAEAAAGE  180
KRKKQRRTRK GQYRNFNGVG GGHNNDHNEG VDNEDDNDID DMNRHGNGAG GGLPTERRRE  240
HPFIVTEPGE VARGKKNGLD YLFHLYEQCR DFLIQVQNIA KERGEKCPTK VTNQVFRFAK  300
KAGASYINKP KMRHYVHCYA LHCLDEEASN ALRRVFKERG ENVGAWREAC YKPLVAIAAG  360
QGWEIDAIFN SHPRLSICHR RSSETSAPEL RSKLRRVVSG HEQMKIAFHQ LKSQIRIGLF  420
QAEEVFASLA IPLMKLVGLK TVEMANEDRF TTIIIPANTD SHQQSFGSGS SDRNRLSVKE  480
EICAAKAAMA GKLVMEKQKD QLIQLIRILK RIETQVNARQ SHMVQTLTHR RLYLHKFFHR  540
AIDYLSTVDR VDHQTFRISV LKLLRAAFHE VGAVLGSVES DVEELLQDLG AQMCDPMVEY  600
VEGVKADLSD GGCVRLVGLV KEMAMAAREV RVELEAARNK ASVAEASKFE ALSRLREAED  660
NVSKLKERLK LLPEPNKASS AKVTKAIAPH KFLGMEKEQT NDEKLLWALL EKKRKYQTPE  720
SPLAPSELPP LPSIYKRHRA KPTAVTRTYS PRARTTPRLD ARILLGSSPS ATIQKAAPLK  780
QISPKMHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.16e-93LFY family protein