PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1140550.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 229aa    MW: 24893.8 Da    PI: 4.6549
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1140550.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.76.8e-1966116155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        + y+GVr++  +g+Wv+e+r+p   +k++r++lg+f tae+Aa+a++ a+ +l+g
  Pd.00g1140550.m01  66 PVYRGVRRRN-SGKWVCEVREP---NKKTRIWLGTFPTAEMAARAHDVAAIALRG 116
                        68*****888.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MDGFCPYYVD PQPCGASSEV PESSSASDNS SARPVSMNFS DEELLLASTY PKKRAGRKKF  60
KETRHPVYRG VRRRNSGKWV CEVREPNKKT RIWLGTFPTA EMAARAHDVA AIALRGRSAC  120
LNFADSAWRL PAPASANAKD IQTTASQAAE AFRPPAEGSD ELSGASAVAA SDCASASEQV  180
FYMDEEAVFG MPGLLANMAE GMLLSPPLYT EDDDDVEFYA DVPLWSYSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.19e-76ERF family protein