PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1140810.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 232aa    MW: 26133.9 Da    PI: 5.8668
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1140810.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.11.4e-0762108654
                        HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                          +Er+RR+ +    + Lr+llP+ +    ++K s +e   +Av+YI ++
  Pd.00g1140810.m01  62 RDNERQRRQLMAVLNASLRSLLPHeL---IKGKRSISEHMNEAVNYITQM 108
                        679*********************88...******************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MMQIEDLVPG HEVLPEGSDP SHNNKKMGKG KQQQQHMILF AHPDNNEANP SDVKVERKIV  60
RRDNERQRRQ LMAVLNASLR SLLPHELIKG KRSISEHMNE AVNYITQMKR KIQELNAKKE  120
KLIRLYEYDS SAQESGLENE TSGHDLVNSV TNIMVGPTCL GGVEVVISSS CSEDEGLPLS  180
RVLKLLLAEG LCVVECASTR VNERVFHTIQ CEVDDLECVD LSELQLKLNL QI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.13e-40bHLH family protein