PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1140820.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 235aa    MW: 26336.2 Da    PI: 10.0255
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1140820.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.50.00058961163555
                        TS-STCHHHHHHHHHHHHHHH CS
                HLH  35 skKlsKaeiLekAveYIksLq 55 
                        ++K s ae   +Av+YIk+Lq
  Pd.00g1140820.m01  96 QGKRSLAEHMNEAVNYIKHLQ 116
                        5799999*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MDVGMFNNIN TGGQQRKSSL ALTLDSAENQ DKSNDDGKKK MMHREIEKKR RQEMAAKKKK  60
WPPFMHHLDP YSLSNTSRFL IYISALDYIL FVEYFQGKRS LAEHMNEAVN YIKHLQTRIK  120
VLGRRRDELK IGTSSLPSLS ASSSTSSTSP RVAVHPCFGG VEIVISRGGS VEQGLVLSRL  180
LKILLGQGLI VISCATTQVN ERLVYTIQSE VSDPAWGDFS GLQQILTESL TRFSN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13860KKKMMHREIEKKRRQEMAAKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.18e-36bHLH family protein