PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1140830.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 231aa    MW: 25873.8 Da    PI: 10.7981
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1140830.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376.3e-1268118355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        ++h e+Er+RR+++ +  + Lr+llP  +   ++K s ++   +Av+YIk+Lq
  Pd.00g1140830.m01  68 MMHRENERQRRQEMGTLHASLRSLLPLEF--IKGKRSISDHMNEAVNYIKHLQ 118
                        68*************************65..*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MMFPLHQGKK LVLQTSSNPP QKHTISEDRI LGHAISTGKS RRRKLVAAFN YDMIDQNSND  60
HNKKKKMMMH RENERQRRQE MGTLHASLRS LLPLEFIKGK RSISDHMNEA VNYIKHLQSR  120
IKRLDAKRAE LKKCSNIIST TGTDHGATTG SSDGRSPSCL TVHPCCGGVQ IVISSRGFRS  180
TKDGLSLSFS ISRVLEVLLE QGLAVVSCVS SKGNDRLLHT IQCEVRRTLN S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.11e-41bHLH family protein