PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1143780.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 148aa    MW: 16799.1 Da    PI: 9.1225
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1143780.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.97.3e-3280137359
                        -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp ++++tYegeH+h 
  Pd.00g1143780.m01  80 DEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERAPDDPAMLIVTYEGEHRHA 137
                        9************************9888****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MAVELMNFPK MEDQKAIQEA ASQGLKSMEH LIRFLSHQQQ TNQSSRLDCT DITDHTVKNR  60
VKKTIRVPAI SSKIADIPPD EYSWRKYGQK PIKGSPYPRG YYKCSTVRGC PARKHVERAP  120
DDPAMLIVTY EGEHRHAPES VGLAFEST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.25e-52WRKY family protein