PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1147300.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 257aa    MW: 29347.4 Da    PI: 7.9304
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1147300.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.92.1e-1042109172
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 
                        ++Y++YA++vGF ++k++skk  + ge +  t+ Cs+ g ++++ ++     ++ ++ +++C a+l+ + ++
  Pd.00g1147300.m01  42 DYYKKYANRVGFPMKKRTSKKG-DCGELKYVTLSCSRLGIPQSTASN---VLKPYTSIKCNCMAQLMAEYKS 109
                        69**************999887.8889****************9988...7788888999999999888775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MSEENDEVEI GETGLENTMS PEEATQEPKV HMIFNTADEV LDYYKKYANR VGFPMKKRTS  60
KKGDCGELKY VTLSCSRLGI PQSTASNVLK PYTSIKCNCM AQLMAEYKSF SADFRCSTHY  120
FMEKQAQGVY TIAKFKEFQD ELTEKYILRK WGKDVTRRHT KIKISNNESN ATLVAHQCDK  180
MQKTFDEIKE LATDSEERCV IVMAWMQKLK EQLSNHNNVC GGTQPTPKSP TSRNFDNCVN  240
EISNSKKILT PLAQLAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.12e-06FAR1 family protein