PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1149030.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 906aa MW: 99780.5 Da PI: 7.0013

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1149030.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.8	8.5e-18	326	425	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k l+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ Pd.00g1149030.m01 326 FEKMLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-P 415 89************************555567778***********99899999999.*******************876.7 PP EE..EEEEE- CS B3 89 efelvvkvfr 98 e++l +++++ Pd.00g1149030.m01 416 EGKLIMGFRK 425 7777777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 906 aa Download sequence
MEPRTCMNAA CGTSSSIEWK KGWALRSGGF ANLCLKCWSA YEQSIFCDIF HSKESGWREC 60 ILCGKRLHCG CIASMFLLDL LDGGGVKCIK CAKSSEPQPI LSDEKPDGLG ISKISELQPT 120 AQDNQLDGTN VEKLKLIQLG NNKDCNGFRN LLQLQNNDAN GLLQKMKHAD TPPPVGEIGG 180 TCLSNFNLAS NGSSEAPKAE VFKANLGIND IYDSLPQTNL SMSLGAPLGK ANPVPAAMFD 240 EREHSKTSSP LLPGARSRNL FPKPPKLVLG AGLEENSTIA SHARVARPPA EGRGRNQLLP 300 RYWPRITDQE LQQISGDSNS TIVPLFEKML SASDAGRIGR LVLPKACAEA YFPPISQPEG 360 LPLRIQDVKG KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRMDPEGKLI 420 MGFRKASNSV AMQDTHLTAI HNGAHSSETF FSGVFENLPV ISGYPGLLQS LKGSMDPHLN 480 ALSKHLTTAS GDISWHKSEK QEGRTREGML LPSLLVPERK RTRNIGSKSK RLLIDSQDAL 540 ELKLTWEEAQ DLLRPPPAAK PSTIMIEDLE FEEYEEPPVF GKRSIFIVRS TGEHEQWAQC 600 DSCSKWRRLP VDVLLPSKWT CADNAWDQSR RSCSAPDELA PRELESFLRM SKEFKKRRTV 660 ADNRPTQEHE SSGLDALANA AILGDNAADP GTASVATTTK HPRHRPGCSC IVCIQPPSGK 720 GKHKPNCTCN VCNTVKRRFK TLMINKKKRQ SEREAEIAYR NQHAWGPRDE AEVDSTSRHV 780 SSHVDPSDNE ARSANESDSK SQSKVAETGK GILDLNCHPG REGEQQAGPN HVSMMSLVQV 840 ASLPLETYLK HNGLTSLMSE QQATSSTSHV PPQATNESED QHNENQCQEQ ESGGEERPDQ 900 GQDDPL

Sequence ? help Back to Top

Protein Sequence Length: 906 aa Download sequence

MEPRTCMNAA CGTSSSIEWK KGWALRSGGF ANLCLKCWSA YEQSIFCDIF HSKESGWREC  60
ILCGKRLHCG CIASMFLLDL LDGGGVKCIK CAKSSEPQPI LSDEKPDGLG ISKISELQPT  120
AQDNQLDGTN VEKLKLIQLG NNKDCNGFRN LLQLQNNDAN GLLQKMKHAD TPPPVGEIGG  180
TCLSNFNLAS NGSSEAPKAE VFKANLGIND IYDSLPQTNL SMSLGAPLGK ANPVPAAMFD  240
EREHSKTSSP LLPGARSRNL FPKPPKLVLG AGLEENSTIA SHARVARPPA EGRGRNQLLP  300
RYWPRITDQE LQQISGDSNS TIVPLFEKML SASDAGRIGR LVLPKACAEA YFPPISQPEG  360
LPLRIQDVKG KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRMDPEGKLI  420
MGFRKASNSV AMQDTHLTAI HNGAHSSETF FSGVFENLPV ISGYPGLLQS LKGSMDPHLN  480
ALSKHLTTAS GDISWHKSEK QEGRTREGML LPSLLVPERK RTRNIGSKSK RLLIDSQDAL  540
ELKLTWEEAQ DLLRPPPAAK PSTIMIEDLE FEEYEEPPVF GKRSIFIVRS TGEHEQWAQC  600
DSCSKWRRLP VDVLLPSKWT CADNAWDQSR RSCSAPDELA PRELESFLRM SKEFKKRRTV  660
ADNRPTQEHE SSGLDALANA AILGDNAADP GTASVATTTK HPRHRPGCSC IVCIQPPSGK  720
GKHKPNCTCN VCNTVKRRFK TLMINKKKRQ SEREAEIAYR NQHAWGPRDE AEVDSTSRHV  780
SSHVDPSDNE ARSANESDSK SQSKVAETGK GILDLNCHPG REGEQQAGPN HVSMMSLVQV  840
ASLPLETYLK HNGLTSLMSE QQATSSTSHV PPQATNESED QHNENQCQEQ ESGGEERPDQ  900
GQDDPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein