PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1151650.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 185aa    MW: 20053.7 Da    PI: 6.015
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1151650.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.21.4e-052142223
                       EETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                       +C+ Cg s + + +Lk+H+++H
  Pd.00g1151650.m01 21 TCQECGASVKKPAYLKQHMQSH 42
                       6*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MEMAKEADEE DGEGEREKSN TCQECGASVK KPAYLKQHMQ SHSLEVLFAI VPLSIGPHTK  60
NSKMREVSNL NGPVSGGRPP MKLHQVNLNH ILLGLRCSHG HDLLDVDHTK DLMSILELIV  120
PAGWKVWGHF TEANAKEADE LANQLQSTGI SSGGDGAASS SVFLGFYSLG IPVPSNAYVS  180
FLVLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72050.21e-09C2H2 family protein