PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1152050.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 244aa    MW: 27707.6 Da    PI: 10.1389
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1152050.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.98.3e-1632123187
           trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                        +W+++ + +L++a  ++  +l+rg+l++++W+ev++++     + ++ +r+ +qCk++++ ++k+yk + ++ ++ +   +s++p+f++l+a
  Pd.00g1152050.m01  32 CWSEDATSTLVDAWGRRYLELNRGCLRQKDWQEVADAVnalhgHTKKTHRTDVQCKNRIDTIKKKYKFEMNRVSSSNGALTSSWPFFERLDA 123
                        7****************************************99999*********************9888888877777889******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MGDLTDPQMT PSHATATTPS SNPRPMPVRE DCWSEDATST LVDAWGRRYL ELNRGCLRQK  60
DWQEVADAVN ALHGHTKKTH RTDVQCKNRI DTIKKKYKFE MNRVSSSNGA LTSSWPFFER  120
LDALIGSNYK KPSPSPPVAV PLPLGYRKTP SPATVVTAVA LPQKRSASSA ARLARAIERF  180
GEVYQRVEAE KLRQMVELEK QRMQFANDLE VQRMNMFMDT QVQLERIKHG KRSGSNDIYM  240
RGEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05550.21e-45Trihelix family protein