PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1152940.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 261aa    MW: 28134.2 Da    PI: 9.9764
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1152940.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.5e-202373256
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                       +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g+
  Pd.00g1152940.m01 23 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRGA 73
                       69*******.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MAPREKTATA VRANGNGNVK EVHFRGVRKR PWGRYAAEIR DPGKKSRVWL GTFDTAEEAA  60
RAYDAAAREF RGAKAKTNFP LPSENISLNM TKNNNININK NSSGSNNQSP SQSSTVESSS  120
REPPALMVDS SPLDLNLAQG VSSGGFGSGP IRFPFQHHQV PSVGAVIGVP ASAAAAANHV  180
LYFDSVFRAG MVKSHQFHQR LRFDHHNLQQ HDFHAYGGGG VFACGAQSDS SDSSSVVDLN  240
NHDLPRRGLL DLNLPPPPEL A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-27ERF family protein