PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1153050.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 249aa    MW: 26395.6 Da    PI: 8.0686
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1153050.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof72.75e-239452561
             zf-Dof 25 slsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                       slsqPryfCk+CrryWt+GG+lrnvPvGgg+rk k+ 
  Pd.00g1153050.m01  9 SLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRP 45
                       799******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MDQQNPDQSL SQPRYFCKTC RRYWTQGGTL RNVPVGGGCR KGKRPKTNSS SSSSPSPQPQ  60
APQEDQQTVK NLSTTSPSSN LGAIESTGNL ASHHQYYPGG IGYLSSYAAI QSLNQSQPFN  120
VGGHEQLGGA SSNMSLLQGF NVSAPFGQFY QAGNTKSSMV DQTALYPSDQ EGLLIQPTRP  180
SAASDHDWPH QSFNINRSSA NASSAASESA LWATSTSGNM NTSSTTSSAG PSLNPNQWPD  240
LPGSYGPPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.13e-19Dof family protein