PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1158120.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 699aa MW: 80370.6 Da PI: 7.3324

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1158120.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.6	2.8e-20	63	156	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHe 88 ++Y+e+Ak++GFs+r+++++ + + t+r fvC + g++ ++++++k +r+r+++r+gC+a ++++k++ +w+vt + ++HnHe Pd.00g1158120.m01 63 EYYSEFAKQCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPIKTSHERKPQRNRKSSRCGCQAYMRISKTTelgAPEWRVTGFANHHNHE 154 69***********9998877356667999*********99999999***************99888889*********** PP FAR1 89 la 90 l Pd.00g1158120.m01 155 LL 156 96 PP

Sequence ? help Back to Top
Protein Sequence Length: 699 aa Download sequence
MMSEDAGVML VVYDDPSDQR SLSLDETSST EESPDETRLS LETTNDVIPY IGQRFSTHDA 60 AYEYYSEFAK QCGFSIRRHR TEGKDGVGKG LTRRYFVCHR AGNTPIKTSH ERKPQRNRKS 120 SRCGCQAYMR ISKTTELGAP EWRVTGFANH HNHELLEANQ VRFLPAYRTI SESDKSRILM 180 FAKTGISVQQ MMRLMELEKC VQPGYLPFTE KDVRNLLQTF RKLDPEDESI DLLRMCRNIK 240 EKDPNFKFEY TLDSDHRLEN IAWSYASSVQ SYEIFGDAVV FDTTHRLTAF DMPLGIWVGI 300 NNYGMPCFFG CVLLREESLR SFSWALKAFL SFMYGKAPQT ILTDQNMFLK EAISMEMPTT 360 KHALCIWMIV AKFPSWFNAV LGERYNEWKS EFYRIYNLEN IEDFELGWRD LVNSFGLHSN 420 RHIVTLYGLR SLWALPFLRS HFFAGMTTIG QSKSINAFIQ RFLSAQTRLA HFIEQVAVAV 480 DFKDQAGEQQ TMQQNLQNIS LKTGAPMESH AASTFTPYAF SKLQEQLVLA AHYASFEMED 540 GFLVRHHTKA EGGWKVYWVP REGIISCSCH HFEFSGILCR HALRVLSTGN CFQIPERYLP 600 VRWRRISIPS AKLLQSAPSD HAERIQLLQN IVSTLVTESA KSRERLDIAT EQVSILLSLS 660 LVRILIEDET CQDLLKNQTS HPITKSFLQG ARDVESIGR

Sequence ? help Back to Top

Protein Sequence Length: 699 aa Download sequence

MMSEDAGVML VVYDDPSDQR SLSLDETSST EESPDETRLS LETTNDVIPY IGQRFSTHDA  60
AYEYYSEFAK QCGFSIRRHR TEGKDGVGKG LTRRYFVCHR AGNTPIKTSH ERKPQRNRKS  120
SRCGCQAYMR ISKTTELGAP EWRVTGFANH HNHELLEANQ VRFLPAYRTI SESDKSRILM  180
FAKTGISVQQ MMRLMELEKC VQPGYLPFTE KDVRNLLQTF RKLDPEDESI DLLRMCRNIK  240
EKDPNFKFEY TLDSDHRLEN IAWSYASSVQ SYEIFGDAVV FDTTHRLTAF DMPLGIWVGI  300
NNYGMPCFFG CVLLREESLR SFSWALKAFL SFMYGKAPQT ILTDQNMFLK EAISMEMPTT  360
KHALCIWMIV AKFPSWFNAV LGERYNEWKS EFYRIYNLEN IEDFELGWRD LVNSFGLHSN  420
RHIVTLYGLR SLWALPFLRS HFFAGMTTIG QSKSINAFIQ RFLSAQTRLA HFIEQVAVAV  480
DFKDQAGEQQ TMQQNLQNIS LKTGAPMESH AASTFTPYAF SKLQEQLVLA AHYASFEMED  540
GFLVRHHTKA EGGWKVYWVP REGIISCSCH HFEFSGILCR HALRVLSTGN CFQIPERYLP  600
VRWRRISIPS AKLLQSAPSD HAERIQLLQN IVSTLVTESA KSRERLDIAT EQVSILLSLS  660
LVRILIEDET CQDLLKNQTS HPITKSFLQG ARDVESIGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein