PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g116150.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 668aa    MW: 75352 Da    PI: 5.6468
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g116150.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS399.53.4e-1222946651374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cA+av+++d +  ++lL+++++++s+ gd+mqRla+yf+ +L+ar+a+ ++ +++ l +++++    +++l+a++l+ +++P+ k+
  Pd.00g116150.m01 294 LRTLLTHCAQAVAANDERTGNELLKQIRQHSSSMGDAMQRLAHYFADGLEARMAGYGTPICRDLITKPAP---AADVLKAYNLYLDACPFKKL 383
                       6789************************************************************999999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       s+l  N++I++ +e+++r+HiiDf+i +G+QWp+L+q L+sRp+gpp+lRiTg++ p++g   +e++eetg+rLa++Ae+ +vpfefn+ +a+
  Pd.00g116150.m01 384 SNLFSNKTIMNVAEKATRLHIIDFGIRYGFQWPSLIQNLSSRPGGPPKLRITGIDLPQPGfrPAEMVEETGRRLANYAETNKVPFEFNA-IAQ 475
                       ***********************************************************9*9***************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +++++++e+L+++++E+l+Vn+v++l rllde+v +es++d vLkl+++++P+v++++  + +++++ Fl+rf eal ++s++fd+le+++p+
  Pd.00g116150.m01 476 TWDTIQIEDLKIDRDEVLVVNSVHRLRRLLDETVMVESPKDMVLKLIRKINPDVFTLAIVNGSYSAPFFLTRFREALFHFSTMFDMLETNAPH 568
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++ er+ +Ere++gr+++nv+aceg+er+er et+++W+ r  +aGF+++pl+++++k+ak  l+ ++ + + ++e++++l+lgWk+r  +++
  Pd.00g116150.m01 569 DAPERMLIEREIFGRQAMNVIACEGSERIERPETYKQWQVRNLRAGFTQLPLNQEIVKTAKDRLQSCYHKDFVIDEDRQWLLLGWKGRIGYAL 661
                       ********************************************************************889********************** PP

              GRAS 371 SaWr 374
                       S+Wr
  Pd.00g116150.m01 662 SSWR 665
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 668 aa     Download sequence    
MYPDEDSPEE SDFSDVVLEY ISQMLMEEDM EEKTAMYQES AALHAAEQSY YELLQENSSS  60
PPCDLIHYAD HNHESHPLHC SYNSTTSGST RSIRDCDLLE YKSLHVASQS TSLPFHAPSN  120
ETGNVVDGFA DSLVSILRDP EFSNESELVM QFKRGFEEAS RFLPNANSLN VDFESNTLSL  180
KEGKAEALGM IVKVDKKNEY SSDGSRGKKN PYHEDVSLEG GKSNKLSAVY TESTVSSEMF  240
DRHLLNCGQG ESALCETLQN RTIKIVQQNG QSKGSSGGKA RGKREGGKKD VVDLRTLLTH  300
CAQAVAANDE RTGNELLKQI RQHSSSMGDA MQRLAHYFAD GLEARMAGYG TPICRDLITK  360
PAPAADVLKA YNLYLDACPF KKLSNLFSNK TIMNVAEKAT RLHIIDFGIR YGFQWPSLIQ  420
NLSSRPGGPP KLRITGIDLP QPGFRPAEMV EETGRRLANY AETNKVPFEF NAIAQTWDTI  480
QIEDLKIDRD EVLVVNSVHR LRRLLDETVM VESPKDMVLK LIRKINPDVF TLAIVNGSYS  540
APFFLTRFRE ALFHFSTMFD MLETNAPHDA PERMLIEREI FGRQAMNVIA CEGSERIERP  600
ETYKQWQVRN LRAGFTQLPL NQEIVKTAKD RLQSCYHKDF VIDEDRQWLL LGWKGRIGYA  660
LSSWRAAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein