PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1161750.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 179aa    MW: 19973.3 Da    PI: 5.3148
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1161750.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1542.7e-48398297
              NF-YB  2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95
                        eqd +lPianv+rimk++lP++akisk+ak+ +qec++ef+sfvt+easdkc++e+rkt+ngdd++wal+ lGf++y+++   yl+kyre+e+
  Pd.00g1161750.m01  3 DEQDGLLPIANVGRIMKQILPQRAKISKEAKQRMQECATEFLSFVTAEASDKCHKENRKTVNGDDICWALSALGFDNYAQATIRYLHKYREAER 96
                       69******************************************************************************************** PP

              NF-YB 96 ek 97
                       +k
  Pd.00g1161750.m01 97 DK 98
                       97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MVDEQDGLLP IANVGRIMKQ ILPQRAKISK EAKQRMQECA TEFLSFVTAE ASDKCHKENR  60
KTVNGDDICW ALSALGFDNY AQATIRYLHK YREAERDKAA ANANNNNQNK AADIIIMSSG  120
QEMNDVGDHR AASIYMASQQ GLQVGEQTQT PDLEFRMLEK GDGTKPSVDQ EHNLLSNNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09030.12e-53NF-YB family protein