PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1167470.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 254aa    MW: 27341.9 Da    PI: 9.6127
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1167470.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31e-19120170255
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a+++a+ +++g
  Pd.00g1167470.m01 120 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAALAYDRAAYRMRG 170
                        8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MYGQSGTDAD ITLLDSIRRH LLGETDLRIG NSMANSVTGP IFSRSSSFSS LYPCLTENWG  60
DLPLKEDDSE DMVLYGVLRD AVLTPVSEVP EKKPAPVQPV RPAKQPAQAG PAVVPAKGKH  120
YRGVRQRPWG KFAAEIRDPA KNGARVWLGT FETAEDAALA YDRAAYRMRG SRALLNFPLR  180
VNSGEPDPIR VTSKRSSPEP SSSSSESGSP KRRKKVAVLD PAQAGLEMGA GIGQQQVGGQ  240
VVVSCTRGEQ LLVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1210216PKRRKKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.19e-60ERF family protein