PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g117140.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WOX

Protein Properties

Length: 180aa MW: 20604.1 Da PI: 9.4459

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g117140.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.4	7.8e-21	30	91	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L +lF++ r+ps++++++++++l +++ ++V++WFqN++a+e++ Pd.00g117140.m01 30 KCGRWNPTTEQVKVLTDLFRSgLRTPSTDQIQKISSQLsfygKIESKNVFYWFQNHKARERQ 91 568***************99************************************97 PP
2	Wus_type_Homeobox	114.6	5e-37	30	93	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L++l++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ Pd.00g117140.m01 30 KCGRWNPTTEQVKVLTDLFRSGLRTPSTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQKR 93 678***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MDEGMSGFCI KAASFRGSGG GSGNGNNGTK CGRWNPTTEQ VKVLTDLFRS GLRTPSTDQI 60 QKISSQLSFY GKIESKNVFY WFQNHKARER QKRRKVSIDD KDFTRRDQDK ISSEKQLNQV 120 SEPARVIETL QLFPVNSFDD SEAEKMRFHA NEYFKEATAF AYRVGTEMDH PPLDLRLSFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	2e-65	WOX family protein