PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1174870.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 589aa MW: 65872.1 Da PI: 7.3579

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1174870.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.6	1.9e-10	140	180	7	48
HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +Ed++l + + +G+++W+ Ia+++ +t qc+ rw++yl Pd.00g1174870.m02 140 QEDDILRNQISVHGTDNWAIIASKFK-DKTTRQCRRRWYTYL 180 7**********************9.***********97 PP
2	Myb_DNA-binding	43.3	8.7e-14	186	229	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + Pd.00g1174870.m02 186 KGGWSPEEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 229 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 589 aa Download sequence
MPISGFLPFG GLHQLKILKR STGLRVPLPI GPGGGWRTYP PGKTLQKSSQ VIGCKEDTES 60 FKKGFSLLLF YTSSVLFSPV PPQTLSTLIV VFSLNLWDSE TLRKSNSKGA FEKLESEANQ 120 SGHVIFLGFL TWVGSFRELQ EDDILRNQIS VHGTDNWAII ASKFKDKTTR QCRRRWYTYL 180 NSDFKKGGWS PEEDMLLCEA QKIFGNRWTE IAKVVSGRTD NAVKNRFSTL CKKRAKYEAL 240 AKENATSYIN SNDKRVIIQN GFDTDGTTAP SKKMRRTHIP NLSENCNSGD RLFEQCGKMN 300 QQLRAPFTVL IQNFHNVDNL PDQHNVSSTK EVPGNAQNSK FQGSFLKKDD PKITALMQQA 360 ELLSSLALKV NTENTDQSLE NAWKVLQDFL NQSKESDILS YGITDFDFQL EDLKYLLEDL 420 RSTNEGSRPS WQQPDLYDES PGSSEYSTGS TLLSQTECYV EQNEAEIGTL IEEIQPGSQS 480 IPIRGENDVR ECEKGIVSSG TRKQEIFPSC NEGTKTDAVI SVSSNTEFSS PNQVTPLFRS 540 LAAGIPSPKF SESERSFLLK TLGVESPSPY PSNNPSRPPP CKRALLQSL

Sequence ? help Back to Top

Protein Sequence Length: 589 aa Download sequence

MPISGFLPFG GLHQLKILKR STGLRVPLPI GPGGGWRTYP PGKTLQKSSQ VIGCKEDTES  60
FKKGFSLLLF YTSSVLFSPV PPQTLSTLIV VFSLNLWDSE TLRKSNSKGA FEKLESEANQ  120
SGHVIFLGFL TWVGSFRELQ EDDILRNQIS VHGTDNWAII ASKFKDKTTR QCRRRWYTYL  180
NSDFKKGGWS PEEDMLLCEA QKIFGNRWTE IAKVVSGRTD NAVKNRFSTL CKKRAKYEAL  240
AKENATSYIN SNDKRVIIQN GFDTDGTTAP SKKMRRTHIP NLSENCNSGD RLFEQCGKMN  300
QQLRAPFTVL IQNFHNVDNL PDQHNVSSTK EVPGNAQNSK FQGSFLKKDD PKITALMQQA  360
ELLSSLALKV NTENTDQSLE NAWKVLQDFL NQSKESDILS YGITDFDFQL EDLKYLLEDL  420
RSTNEGSRPS WQQPDLYDES PGSSEYSTGS TLLSQTECYV EQNEAEIGTL IEEIQPGSQS  480
IPIRGENDVR ECEKGIVSSG TRKQEIFPSC NEGTKTDAVI SVSSNTEFSS PNQVTPLFRS  540
LAAGIPSPKF SESERSFLLK TLGVESPSPY PSNNPSRPPP CKRALLQSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	1e-160	MYB family protein