PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1175120.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 97aa    MW: 11270 Da    PI: 4.8366
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1175120.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.81.1e-191970153
                NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka 53
                       + pGfrFhPtdeelv +yLk+k+++++l++ e ik++diyk++PwdLp+ + +
  Pd.00g1175120.m01 19 MLPGFRFHPTDEELVGFYLKRKIQQRPLSI-ELIKQLDIYKFDPWDLPRLMGN 70
                       579***************************.89***************63333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    
MDERSDMNII GGDKMDEVML PGFRFHPTDE ELVGFYLKRK IQQRPLSIEL IKQLDIYKFD  60
PWDLPRLMGN MQDIQENKFK SCSSKSPSSS LLDVCLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.18e-31NAC family protein