PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1175250.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 660aa MW: 73371.4 Da PI: 8.5792

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1175250.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104	8.8e-33	21	75	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLH+rFveav+qLGG++kAtPk+++++m+++gLtl+h+kSHLQkYRl Pd.00g1175250.m01 21 KPRLKWTPELHQRFVEAVNQLGGADKATPKSLMRVMGIHGLTLYHLKSHLQKYRL 75 79****************************************************8 PP
2	Myb_DNA-binding	61	2.5e-19	23	74	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e+++++v+av+qlGg t+k+ +r mg g+tl+++ks++qky+ Pd.00g1175250.m01 23 RLKWTPELHQRFVEAVNQLGGAdkaTPKSLMRVMGiHGLTLYHLKSHLQKYR 74 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MGLLQNMQNQ NMNLVLSTDA KPRLKWTPEL HQRFVEAVNQ LGGADKATPK SLMRVMGIHG 60 LTLYHLKSHL QKYRLGKSQQ SENCTDIKQE DYKEIQSTDD HFDTDISDET HCQINESLQI 120 AESLQLQMEV QRKLHEQIEV QRHLQLRIEA QGKYLQTVLK KAQETLSGYS SSSVGVELAK 180 AELTQLVSMV NNGCPSSSFS ELTETGTSSL KYIERKQMRG SMESSLTSSE SSGRKEEKQP 240 MHKHGGDPEK SNTTCVELPL MDIHPENKPW NNVTNNHVIG RKRSSSPISD GICVEQPISK 300 RTPTQRDKSG QHLRKSGLLA TIDLNSKYQN DIDSGPKVGG SVFDEWGRRH TSADLLEAGN 360 PNNITVLLNA TVKNVIFREK GNRNETIARG IRFIKSDGNS SQTYDAYLNQ PENSCSWGDV 420 ILAAGALGSP QILLLSGIGP QKHLKKFNIQ LAADLKGVGK GMKDNPGIAL LADSKPKNFP 480 PEPPKVVGIA DHFKIIIEAG ILPISLNATV MPIAAKLAFP ESEGKLELNS TDPRENPSVT 540 FNYLAKEKDW ARCVKLGQLL ERVVRSESIA FFLGLERKNE LMSTEDELRK LCKKNVRTFY 600 HYHGGCSVGS VVDKDYRVYG VKGLRVVDGS TFLESPGTNP MATLLMLGRY QGIKILEDRN

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MGLLQNMQNQ NMNLVLSTDA KPRLKWTPEL HQRFVEAVNQ LGGADKATPK SLMRVMGIHG  60
LTLYHLKSHL QKYRLGKSQQ SENCTDIKQE DYKEIQSTDD HFDTDISDET HCQINESLQI  120
AESLQLQMEV QRKLHEQIEV QRHLQLRIEA QGKYLQTVLK KAQETLSGYS SSSVGVELAK  180
AELTQLVSMV NNGCPSSSFS ELTETGTSSL KYIERKQMRG SMESSLTSSE SSGRKEEKQP  240
MHKHGGDPEK SNTTCVELPL MDIHPENKPW NNVTNNHVIG RKRSSSPISD GICVEQPISK  300
RTPTQRDKSG QHLRKSGLLA TIDLNSKYQN DIDSGPKVGG SVFDEWGRRH TSADLLEAGN  360
PNNITVLLNA TVKNVIFREK GNRNETIARG IRFIKSDGNS SQTYDAYLNQ PENSCSWGDV  420
ILAAGALGSP QILLLSGIGP QKHLKKFNIQ LAADLKGVGK GMKDNPGIAL LADSKPKNFP  480
PEPPKVVGIA DHFKIIIEAG ILPISLNATV MPIAAKLAFP ESEGKLELNS TDPRENPSVT  540
FNYLAKEKDW ARCVKLGQLL ERVVRSESIA FFLGLERKNE LMSTEDELRK LCKKNVRTFY  600
HYHGGCSVGS VVDKDYRVYG VKGLRVVDGS TFLESPGTNP MATLLMLGRY QGIKILEDRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69580.1	4e-84	G2-like family protein